Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRHSKRTYCPDWDDKDWDYGKWRSSSSHKRRKRSHSSAQENKRCKYNHSKMCDSHYLESRSINEKDYHSRRYIDEYRNDYTQGCEPGHRQRDHESRYQNHSSKSSGRSGRSSYKSKHRIHHSTSHRRSHGKSHRRKRTRSVEDDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVK-NVDRYCEAARSEIQVLEHLNTTDPNSTFRC--VQMLEWFEHHGHICIVFELLG--LSTY-DFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA-TYDDEHHST-LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRRCKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKSI |
| 4TTH Chain:B ((15-304)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------CVAEIGE----KVFKARDLKNG-RFVALKRVRV--EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT-------TKLTLVFEHVDQDLTTYLDKVPEPGV---PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG-------------------QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG-LPGEE---------------DWP--------------PIEKF--DID---ELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TTH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161953 for 1851 contacts (-87.5/contact) +
2D Compatibility (PS) -26734 + (NN) -11302 + (LL) 10864
1D Compatibility (HY) -22800 + (ID) 4850
Total energy: -216775.0 ( -117.11 by residue)
QMean score : 0.410
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