Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IDCGHVDSLVRPCLSYVQ----GGPG-P-----SGQCCDGVKNLHNQARSQSDRQSACNCLRGIARGIH-------N---LN----------EDNARGT--PLKCGVNLPYTISLNIDCSRV
1BEA Chain:A ((15-109))
-------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35404 for 386 contacts (-91.7/contact) +
2D Compatibility (PS) -6579 + (NN) -3281 + (LL) 1428
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -47636.0 ( -123.41 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: