Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVSCGQVSSALSPCISYARGNGANPSAACCSGVRSLASSARSTADKQAACKCIKSAAAGLNAGKAAGIPTKCGVSVPYTISSSVDCSKIR
M033 Chain:A ((1-96))
AVSCGQVSSALSPCISYARGNGANPSAACCSGVRSLASSARSTADKQAACKCIKSAAAGLNAGKAAGIPTKCGVSVPYTISSSVDCSKIR
General information:
TITO was launched using:
RESULT:
Template:
M033.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49347 for 671 contacts (-73.5/contact) +
2D Compatibility (PS) -9498 + (NN) -2968 + (LL) 0
1D Compatibility (HY) -9600 + (ID) 4500
Total energy: -75913.0 ( -113.13 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_M033.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M033-query.scw
PDB file :
Tito_Scwrl_M033.pdb
: