Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVANCGQVVSYLAPCISYAM----GRVSVP-----GGGCCSGVRGLNAAAATPADRKATCTCLKQQASGMG-------G---IK----------PDLVAGI--PSKCGVNIPYAISPRTDCSKVR
1BEA Chain:A ((15-109))
---------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47941 for 389 contacts (-123.2/contact) +
2D Compatibility (PS) -6380 + (NN) 744 + (LL) 2072
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -54105.0 ( -139.09 by residue)
QMean score : 0.233
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: