Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------QAPP-----PPPQCDPGLLSPCAAPI-----------FFGTAPSASCCSSLKAQQGCFCQYAKDPTYASYI-NSTNARKMIAACGIPFPNCS------------------------------------------------------------------------------- |
1KFS Chain:A ((1-195)) | MISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21283 for 431 contacts (-49.4/contact) +
2D Compatibility (PS) -8321 + (NN) -5105 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -37259.0 ( -86.45 by residue)
QMean score : 0.417
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