Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------------------------------------------------------------------GIVKVSWGEK-KVACTVTEL-QPCLPSVIDGSQPSTQCCEKLKEQNSCFCDYLQN-PQFSQYITAAKQILAACKIPYPNC
1ELK Chain:A ((1-153))
SDFLLGNPFSSPVGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSWADAFRSSPDL-TGVVTIYEDLRRKGLEFPM-
General information:
TITO was launched using:
RESULT:
Template:
1ELK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23097 for 443 contacts (-52.1/contact) +
2D Compatibility (PS) -8034 + (NN) -5563 + (LL) 28
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -39516.0 ( -89.20 by residue)
QMean score : 0.340
(partial model without unconserved sides chains):
PDB file :
Tito_1ELK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ELK-query.scw
PDB file :
Tito_Scwrl_1ELK.pdb
: