Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------EDCTVDLKGLIRECKQYVMFPASPKITPSSACCSVVQKVNSPCL-------------CSKVTKEIEKVVCMDKVVYVADYYKNPLKPGSDCGSYHVPSQRR--
1QJT Chain:A ((7-105))
LSLTQLSSG-----NPVYEKYYRQVEAGNTGRVL-ALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSK--QEFFVALRLVACAQN-GLEVSL--SSLSLAVPPPRFHD
General information:
TITO was launched using:
RESULT:
Template:
1QJT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22247 for 473 contacts (-47.0/contact) +
2D Compatibility (PS) -8151 + (NN) -6597 + (LL) 460
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -39485.0 ( -83.48 by residue)
QMean score : 0.304
(partial model without unconserved sides chains):
PDB file :
Tito_1QJT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QJT-query.scw
PDB file :
Tito_Scwrl_1QJT.pdb
: