Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ERCNDSGIEVLRGCPDSIDKELPTPP-RPSQGCCTLVRIIGMECVCEVINKEIEAAIDMQKLVNVAAACGRPLAPGSQCGSYLVPGGMIRH
1JJU Chain:A ((274-351))
-----------AAPQVLAVAPARLKIGEETQLRVAGTGLGSDLTLPEGVAGSVESAGN-GVTVLKLTATGTPGPVSLELGGQKVDLVAYD-
General information:
TITO was launched using:
RESULT:
Template:
1JJU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11531 for 546 contacts (-21.1/contact) +
2D Compatibility (PS) -8127 + (NN) -846 + (LL) 832
1D Compatibility (HY) 4000 + (ID) 500
Total energy: -16172.0 ( -29.62 by residue)
QMean score : -0.012
(partial model without unconserved sides chains):
PDB file :
Tito_1JJU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JJU-query.scw
PDB file :
Tito_Scwrl_1JJU.pdb
: