Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APAGTTCEQLESVARSCTGYLKRSLIFLNDACCDGAESVYDALTTDAAVDLGFVCRCLRGFVIS-ESLRPYLYRVANLPRLCRFKDRGPIPYNNSTIHDCRFSGTTRHSL
1FK5 Chain:A ((1-93))
---AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTA--DRRAACNCLKNAAAGVSGLN--AGNAASIPSKCGVS----IPYTISTSTDC----SRVN--
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70063 for 653 contacts (-107.3/contact) +
2D Compatibility (PS) -9317 + (NN) -326 + (LL) 328
1D Compatibility (HY) 800 + (ID) 1350
Total energy: -79928.0 ( -122.40 by residue)
QMean score : 0.274
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: