Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VYRPWPSECVEVANV-MVEQCKMFFVHQESPPTAECCRWFSSRRKYAKERRRLCR------CLEFLTTAFKNLKP----DVLALSDQCHFSSGFP--MSRD-----HTCA
2HFT Chain:? ((1-106))
---SGTTNTVAAYNLTWKSTNFKTILEWEPKPVNQ--VYTVQISTKSGDWKSKCFYTTDTEC-DLTDEIVKDVKQTYLARVFSYPAGNVESTEPLYENSPEFTPYLET--
General information:
TITO was launched using:
RESULT:
Template:
2HFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13679 for 488 contacts (-28.0/contact) +
2D Compatibility (PS) -8734 + (NN) -35 + (LL) 872
1D Compatibility (HY) 400 + (ID) 600
Total energy: -21776.0 ( -44.62 by residue)
QMean score : 0.087
(partial model without unconserved sides chains):
PDB file :
Tito_2HFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HFT-query.scw
PDB file :
Tito_Scwrl_2HFT.pdb
: