Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QATATAPSCTDVISNTAPCLPYISR----TSPA-----PSDVCCAGIKNVAAMASTHANQVDICTCLKSNIAGF----S---------Y-----D----PTLIAALPKKCSVSINLLPISASTDCSKVSLGN
1B1U Chain:A ((15-108))
-------------NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--------PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATI-----------------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33684 for 395 contacts (-85.3/contact) +
2D Compatibility (PS) -6065 + (NN) 1774 + (LL) 2428
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -38797.0 ( -98.22 by residue)
QMean score : 0.208
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: