Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------HITCGTVTSTMTQCISYLTN---GGPLP----SSCCVAVKSLNQMAQTTPDRRQVCECLKSAGKEI-------KGLN----IDLVAALPTTCGVSLSYPIGFNTNCDSISIAV------
1HSS Chain:A ((5-124))
MCYPGQAFQV-------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV--VDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67838 for 517 contacts (-131.2/contact) +
2D Compatibility (PS) -8147 + (NN) -5221 + (LL) 864
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -84942.0 ( -164.30 by residue)
QMean score : 0.434
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: