Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ITCGQVSSSLAPCVNFLK----SGGA-P-----SPQCCNGLGGMVNQAKSTADKQAACNCLKTAAKNMP-------G---LN----------PANAESL--PSKCKVNIPYKISFSTNCNSIK
1BEA Chain:A ((15-109))
-------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29741 for 386 contacts (-77.0/contact) +
2D Compatibility (PS) -6390 + (NN) -1550 + (LL) 1656
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -40625.0 ( -105.25 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: