Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITCGQVAS--NISPCVTYVKSGGAVPA---PCCSGIRNLNGMAK-----------TTADRQATCNCLKQAAGGI-----KGLNPNLAAGLPGKCGVSVPYKISTTTNCAAVK-------- |
1QPO Chain:A ((1-284)) | GLSDWELAAARAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNAAPDLPCEVEVDS-LEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32340 for 459 contacts (-70.5/contact) +
2D Compatibility (PS) -8940 + (NN) -1751 + (LL) -296
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -46877.0 ( -102.13 by residue)
QMean score : 0.318
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