Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGQITSALAPCIAYLKGNG----AG-------SAPPACCNGIRSLNSAAKTTPDRQAACSCIKSAATGISG-----INYSTAAGLPGKCGINIPYKISPSTDCKSIK
1S6D Chain:A ((19-97))
--------EMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLD--------EKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM---------------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38460 for 419 contacts (-91.8/contact) +
2D Compatibility (PS) -6365 + (NN) -28 + (LL) 1356
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -48247.0 ( -115.15 by residue)
QMean score : 0.204
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: