Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------LNCGQVDS--KMKPCLTYVQGGPGPSGEC---CNGVRDLHNQAQ-----------SSGDRQTVCNCLKGIARGIH-----NLNLNNAASIPSKCNVNVPYTISPDIDCSRIY----------- |
| 1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNA-APDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVG---ALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15149 for 440 contacts (-34.4/contact) +
2D Compatibility (PS) -8672 + (NN) -1825 + (LL) -92
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -29238.0 ( -66.45 by residue)
QMean score : 0.385
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