Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AITCQQVTVAVTPCIGYAR----TGGT-M-----PPDCCNGVRNLNSAAKNTPDRQQACICLKQMS-SIP-------G---IN----------MSIVSEI--PAKCNVNIGYPIAMSTDCSKVK
1BEA Chain:A ((15-109))
--------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52236 for 377 contacts (-138.6/contact) +
2D Compatibility (PS) -6122 + (NN) 1438 + (LL) 1820
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -58800.0 ( -155.97 by residue)
QMean score : 0.268
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: