Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ISCTEAVAAMNPCLPFLIG----AQA-SP----VAPCCLAVQNVNQEASTKEIRRELCDCFKKAGPAL----G---------VK---------PDKAKQLPDLCHVQVPVPIDPTIDCSKVTEDIAW
1B1U Chain:A ((16-109))
--------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--------PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH-----------------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38652 for 395 contacts (-97.9/contact) +
2D Compatibility (PS) -6166 + (NN) -389 + (LL) 2244
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -44513.0 ( -112.69 by residue)
QMean score : 0.300
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: