Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AITCGQVSSALSPCIPYARGN---G--A-NP-----------SAACCSGVRRIAGAVQSTADKKTACNCIKRAAGGL-------N-----AGKAADIPSKCSVSIP--YAINPSVDCSTIR
1W2Q Chain:A ((23-121))
--------VNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-----N-TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDLDV--------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29810 for 406 contacts (-73.4/contact) +
2D Compatibility (PS) -6818 + (NN) -380 + (LL) 1440
1D Compatibility (HY) -3200 + (ID) 450
Total energy: -39218.0 ( -96.60 by residue)
QMean score : 0.403
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: