Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------VTCDPVEL---SACANAITSSSPPSAICCSKLKQQRPCLCQYVKNPNLQKLVNSPNAKKVATICGSPFPNC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 1PS6 Chain:A ((1-328)) | VKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTNRAAMLGLPLTLRPYSPNSPAQPQTAGTLTLLPVALRAPVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLNELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKMIVNTQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PS6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10393 for 336 contacts (-30.9/contact) +
2D Compatibility (PS) -7336 + (NN) -5713 + (LL) 0
1D Compatibility (HY) 2000 + (ID) 550
Total energy: -21992.0 ( -65.45 by residue)
QMean score : 0.328
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