Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------------------------------------------------DFSALAPCDVTQLTPCASAFAGKASPTAACCAKLMSHGP----VCLCRYKDDASL------KRLVDARHKRRVFTAC---KVPVPSC-------------------------------
1G5Q Chain:A ((1-174))
MYGKLLICATASINVININHYIVELKQHFDEVNILFSPSSKNFINTDVLKLFCDNLYDEIKDPLLNNINIVENHEYILV-LPASANTINKIANGICDNLLTTVCLTGYQKLFIFPNMNIRMWGNPFLQKNIDLLKNNDVKVYSPDMNKSFEISSGRYKNNITMPNIENVLNFVLN
General information:
TITO was launched using:
RESULT:
Template:
1G5Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27651 for 417 contacts (-66.3/contact) +
2D Compatibility (PS) -7644 + (NN) -5407 + (LL) 64
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -42238.0 ( -101.29 by residue)
QMean score : 0.405
(partial model without unconserved sides chains):
PDB file :
Tito_1G5Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G5Q-query.scw
PDB file :
Tito_Scwrl_1G5Q.pdb
: