Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EMAHGVC----NLSSAGIRACQPAAA---IRNPTDQPS-SECCAALAGADLACLC------------RYKNAAGVWVRFYRIDINRAMGLPGKCGLAMPANC-----------------
1HSS Chain:A ((5-124))
-----MCYPGQAFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVV---KLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42411 for 404 contacts (-105.0/contact) +
2D Compatibility (PS) -8015 + (NN) -1543 + (LL) 556
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -55263.0 ( -136.79 by residue)
QMean score : 0.273
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: