Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------------------------------------------------QCDPEQLVACASPIFYGTAPS-------------ESCCSNLREQQKE-----GCLCQYAKDPMYASYVN--NTNARKTIAACGIPI-----PSC--------------------------------------------- |
1KZF Chain:A ((1-210)) | MLELFDVSYEELQTTFSDRLGWEVICSQGMESDEFDGPGTRYILGICEGQLVCSVRFTSLDRPNMITHTFQHCFSDVTLPAYGTESSRFFVDKARARALLGEHYPISQVLFLAMVNWAQNNAYGNIYTIVSRAMLKILTRSGWQIKVIKEAFLTEKERIYLLTLPAGQDDKQQLGGDVVSRTGCPPVAVTTWPLTLPV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KZF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12478 for 283 contacts (-44.1/contact) +
2D Compatibility (PS) -6939 + (NN) -2011 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -23878.0 ( -84.37 by residue)
QMean score : 0.268
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