Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKTPIRSAAASLSPCLSAAGNVRAAVPPTCCSKVGSLIK-TAPKCLCAVLLSPLAKQAGI-KPGIAIT-IPKRCNIGNRPAGKKCGSK
1HYP Chain:? ((6-80))
-PSCPD---------LSICLNILGG-SLGTVDDCCALIGGLGDIEAIVCLCIQLRA-----LGILNLNRNLQLILNSCG-RSYPSNATCPRT
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41377 for 469 contacts (-88.2/contact) +
2D Compatibility (PS) -7227 + (NN) -764 + (LL) 1496
1D Compatibility (HY) -4800 + (ID) 1050
Total energy: -53722.0 ( -114.55 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: