Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------VTCNALQLSPCASAITSSTPP-----SPLCCSKLKEQRPCLCNYVKD-PNLQKL-VNSPNARKVASICGS-PFPNC-----------------------------
1XFL Chain:A ((1-114))
MASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA
General information:
TITO was launched using:
RESULT:
Template:
1XFL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2224 for 380 contacts (-5.9/contact) +
2D Compatibility (PS) -7256 + (NN) -992 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -13072.0 ( -34.40 by residue)
QMean score : 0.327
(partial model without unconserved sides chains):
PDB file :
Tito_1XFL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XFL-query.scw
PDB file :
Tito_Scwrl_1XFL.pdb
: