Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------ACSLSQVRTCTSAVIAPNQMP---SQQCCSELSAITDFNCFCSMLLNQ--------GTNLN---QDYINNALLIPSKCG----EQGRNLRGQRCGNYA-IP--
1HSS Chain:A ((5-124))
MCYPGQAFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISE-WCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46870 for 511 contacts (-91.7/contact) +
2D Compatibility (PS) -8512 + (NN) -3137 + (LL) 132
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -63287.0 ( -123.85 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: