Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--ACGS-SYDLAACLPAAES-DIQPSAQCCTQLSSYLATDT---PEECLCQTAYSPFFQ-SGADIQFAIKIPQKCNLS--Y--RAGIQCNGNTIPGGQ
1FK5 Chain:A ((1-93))
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCS--RVN---
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31434 for 527 contacts (-59.6/contact) +
2D Compatibility (PS) -8171 + (NN) -1435 + (LL) -476
1D Compatibility (HY) -1200 + (ID) 1100
Total energy: -43816.0 ( -83.14 by residue)
QMean score : 0.407
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: