Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EVSCGDSVRALIPCGSFLVGA--DAA-A-----AP-----------SESCCRGALALRGMASTTAARRELCKCLMQSGPSF---G-V-------LPDRARQLPARCNLGVAIPVGPETDCDKIP
1PSY Chain:A ((26-120))
---------DLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV--------RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGVRCMR------------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29141 for 481 contacts (-60.6/contact) +
2D Compatibility (PS) -6522 + (NN) -468 + (LL) 768
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -38713.0 ( -80.48 by residue)
QMean score : 0.261
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: