Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IC----DISSGGIRSCQPAAA---VRNPTDAPS-AECCAALAGADLACLCR---------YKSVGGMWVRFYKID----VKRAMALPGKCGLTMPANC-----------------
1HSS Chain:A ((5-124))
MCYPGQAFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAF----PRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38536 for 393 contacts (-98.1/contact) +
2D Compatibility (PS) -8103 + (NN) -3733 + (LL) 580
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -54142.0 ( -137.77 by residue)
QMean score : 0.415
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: