Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------AGECGRVPVDRTALKLAPCAAATQNPRAAVPPSCCAQVRGIGRNPKCLCAVMLSNTARQAGVKPAVAMTIPKRCAIANRPIG--YKCGPYTLP-------------------------- |
| 1G8L Chain:A ((7-177)) | LMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAVRLADIASGQ---------PLPVAGKSFAGQPYHGEWPAGTCIRIMTGAPVPEGCEAVVMQEQTEQMD--NGVRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPVIRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14176 for 428 contacts (-33.1/contact) +
2D Compatibility (PS) -8363 + (NN) -5230 + (LL) 560
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -29709.0 ( -69.41 by residue)
QMean score : 0.302
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