Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-VCDMDNDDFMACQPAAAATTSPTPPDPSAACCATLGKADLKCLCSYKKSPWLSLYNIDPKRAMELPAKCGLSPPADC-
1L6H Chain:A ((1-69))
AGCNAGQ--LTVCTGAIAGGA-----RPTAACCSSLRAQQ-GCFCQFAKDPRYGRY-VNSPNARKAVSSCGIAL-PTCH
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25767 for 502 contacts (-51.3/contact) +
2D Compatibility (PS) -6835 + (NN) -6074 + (LL) -592
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -43818.0 ( -87.29 by residue)
QMean score : 0.299
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: