Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASCSTQMASLANDCSALLGSNDPEAPTKDCCDAILA-ADTR---CVCRYVTPMVVRLVNMKRVVHIAAT-CGRNIPHGFKCGNYTVP
1HYP Chain:? ((6-80))
PSCPD-----LSICLNIL--GGSLGTVDDCCALIGGLGDIEAIVCLCIQLRAL--GILNLNRNLQLILNSCGRSYPSNATCPRT---
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43560 for 417 contacts (-104.5/contact) +
2D Compatibility (PS) -7226 + (NN) -3456 + (LL) 908
1D Compatibility (HY) -6000 + (ID) 900
Total energy: -60234.0 ( -144.45 by residue)
QMean score : 0.308
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: