Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DDDATLDCDSQVNGLAGNCMTAVLIGTKPSSKCCKFVRS-AQLD---CLCPKITKDVTKMITERLLSTALKIAKQCNWELPHNYQCGSYTFP
1HYP Chain:? ((6-80))
-----PSCPD-----LSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQL-RALGILNLNRNLQLILNS---CGRSYPSNATCPRT---
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31980 for 432 contacts (-74.0/contact) +
2D Compatibility (PS) -7290 + (NN) -1812 + (LL) 628
1D Compatibility (HY) -4400 + (ID) 700
Total energy: -45554.0 ( -105.45 by residue)
QMean score : 0.329
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: