Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QREPAKCGSSDAGSVLMPCFAFLEQQSREPSARCCSAVANSTQKEPPRCLCVFLDQLARAMNRTQPLQ-LPSLCGDARLTAERCKGLFVANRFA
1HYP Chain:? ((6-80))
---PS---CPD----LSICLN-ILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRALGI-LNLNRNLQLILNSCGRSYPSNATCPRT-------
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26917 for 484 contacts (-55.6/contact) +
2D Compatibility (PS) -7540 + (NN) 296 + (LL) 1448
1D Compatibility (HY) -5200 + (ID) 950
Total energy: -38863.0 ( -80.30 by residue)
QMean score : 0.142
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: