Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCSNNYSALLPCAAATRSATATPSGACCKVVEGFKSNPACLCSTIAAAKAAGYSINEHNAESIPTRCKLHGYTSCSKKN
1L6H Chain:A ((1-69))
AGCN--AGQLTVCTGAI-AGGARPTAACCSSLR---AQQGCFCQFAKDPRYGRY-VNSPNARKAVSSCGIA-LPTCH---
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38544 for 524 contacts (-73.6/contact) +
2D Compatibility (PS) -6872 + (NN) -1016 + (LL) -188
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -51520.0 ( -98.32 by residue)
QMean score : 0.262
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: