Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
YCKESLHLCMQHLKLNDRPTWLKCCDRLIIPGPCMCKYIKDPVQWKEAYRLMASCGKTVPLNQSLKSYFKCG
1TER Chain:A ((5-15))
------------------------CNRIIIPHMCW-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1TER.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3413 for 36 contacts (-94.8/contact) +
2D Compatibility (PS) -1146 + (NN) -1667 + (LL) 4196
1D Compatibility (HY) -2400 + (ID) 300
Total energy: -4730.0 ( -131.39 by residue)
QMean score : 0.139
(partial model without unconserved sides chains):
PDB file :
Tito_1TER.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TER-query.scw
PDB file :
Tito_Scwrl_1TER.pdb
: