Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFNSLLVFDIETIPDVNSCRNLLNISDDSSLKEKRNALTKYHLEITNGQNPFLRQPFHQVIVISFLLCSVTYQSNYEVFTLQEIRSEGTLDSSEKELVKGFFNCVSEKKPRLISFNGRTFDIPVLKYRAMVHDVQAEYFHKAGDKWNSYNQRYSSNWHCDLLESLSD-----F---GAFARVKMNEVCAVFNLPGKIGVDGSQVVDLYDSGRIQEIRDYCETDVVNTYLIYLRFMHHQGRITTRSYNKNIEELLLECEKKAHLRKFKEEWEITCGGRFCVEFK
1S5J Chain:A ((256-390))--------------------------------------------------------------------------------------------TEYELLGRFFDILLE-YPIVLTFNGDDFDLPYIYFRALKLGYFPEE-IPIDVA-GKDEAKYLAGLHIDLYKFFFNKAVRNYAFEGKYNEYNLDAVAKALLGTS--KVDTL-----ISFLDVEKLIEYNFRDAEITLQLTTFNNDLTMKLIVLFSRISRLGIEELTRTEISTWVKNLYYWEHRKRNWLIPLK


General information:
TITO was launched using:
RESULT:

Template: 1S5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30778 for 780 contacts (-39.5/contact) +
2D Compatibility (PS) -13305 + (NN) -3316 + (LL) 7600
1D Compatibility (HY) -8400 + (ID) 1350
Total energy: -49549.0 ( -63.52 by residue)
QMean score : 0.171

(partial model without unconserved sides chains):
PDB file : Tito_1S5J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1S5J-query.scw
PDB file : Tito_Scwrl_1S5J.pdb: