Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFNSLLVFDIETIPDVNSCRNLLNISDDSSLKEKRNALTKYHLEITNGQNPFLRQPFHQVIVISFLLCSVTYQSNYEVFTLQEIRSEGTLDSSEKELVKGFFNCVSEKKPRLISFNGRTFDIPVLKYRAMVHDVQAEYFHKAGDKWNSYNQRYSSNWHCDLLESLSD-----F---GAFARVKMNEVCAVFNLPGKIGVDGSQVVDLYDSGRIQEIRDYCETDVVNTYLIYLRFMHHQGRITTRSYNKNIEELLLECEKKAHLRKFKEEWEITCGGRFCVEFK |
1S5J Chain:A ((256-390)) | --------------------------------------------------------------------------------------------TEYELLGRFFDILLE-YPIVLTFNGDDFDLPYIYFRALKLGYFPEE-IPIDVA-GKDEAKYLAGLHIDLYKFFFNKAVRNYAFEGKYNEYNLDAVAKALLGTS--KVDTL-----ISFLDVEKLIEYNFRDAEITLQLTTFNNDLTMKLIVLFSRISRLGIEELTRTEISTWVKNLYYWEHRKRNWLIPLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30778 for 780 contacts (-39.5/contact) +
2D Compatibility (PS) -13305 + (NN) -3316 + (LL) 7600
1D Compatibility (HY) -8400 + (ID) 1350
Total energy: -49549.0 ( -63.52 by residue)
QMean score : 0.171
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