Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVEVFLNN-ATKKIEGEYHQSK------ETNAPVVLILHHHPQYGGSMDSKMI-HSIYTSFIDNNFSALKINFRGVGKSTGTF-----------DKGIGELT-DAAIAIDWLQEHNPSNVPIWIVGFSFGAWVAMQLTMRRP----EIVGFIALSLPATKY-------------------------------------------------------------------D--------F-------------------------------------------SFLSPCPVPGLIIQSSNDTISEESDVTELANRLINSVKSDHMEYHIIGDTNHF---LRDK-EEEVTQIIDNYVKLRLNSAAISSQMVKKEIRIKEYA |
| 1K8Q Chain:A ((29-376)) | --EYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKT-GQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSK-LPN----LIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTD--------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1K8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -124588 for 1745 contacts (-71.4/contact) +
2D Compatibility (PS) -21713 + (NN) -8184 + (LL) 2712
1D Compatibility (HY) -4400 + (ID) 1850
Total energy: -158023.0 ( -90.56 by residue)
QMean score : 0.427
|
|
|