Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDNHFMSIALSLAEKTLGNVAPNPAVGCIIVKDGVVVGEGHTGIGGRPHAEVAALQSAKGSTHGATMYVTLEPCCHYGVTEPCIIEIIRSGIKKVVVAAIDPDKRVSGGGIKALEEAGITVEQGIMQEEAEKLNIGFFTTRKLHRPFIACKIATTLDGKIATFKGDSKWITSGSTRNWVHELRAKYDAIMIGSNTLINDDPLLTCR-LPGLESRS---PIRLIIDSQEKLKEKHNVVKTADKVTTWVIINKKIEKKIKNINYLIVNSNDKPIPASHTGMTSNQGEYSTDKVCLKDMALKLVSEIGITRLLVEGGRVLTTELLKHDLIDRLIICRSGKILGNDAIPFIGNLEIQSINNCYQFKKAEIIDFDEDIVEVWDKLQ |
| 3ZPC Chain:B ((28-371)) | --DQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFHPKAGQPHAEVFALRQAGEQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGIEVEIGICEDLAAKLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDVQHWRAISGAVITGIDTVIADDCQLNVRSLHNIDIETVAQPKRVILDRRGRLPLTAKILENPETV----MVMGPYRQELADLG--VIQLEIQP---------------------LKTLLQTLSKQYQIYDVLIEAGATLSSAFLQEGLIDEMISYVAPTLLGQSARAMF-NADFEYMAQQLRFKLLDVIQLDQDIRLRLIPTQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ZPC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -182477 for 2849 contacts (-64.0/contact) +
2D Compatibility (PS) -36857 + (NN) -17364 + (LL) 1620
1D Compatibility (HY) -27600 + (ID) 6250
Total energy: -268928.0 ( -94.39 by residue)
QMean score : 0.549
|
|
|