Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMARNYYEILEY---VAPEEINKAYKRLGLKCHPDKLLP---KKRKISRIVKKAINGAALSKLELEEMQSL
2DN9 Chain:A ((6-65))-SGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQL-AEAYE--VLSDEVKRKQYDA


General information:
TITO was launched using:
RESULT:

Template: 2DN9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21551 for 319 contacts (-67.6/contact) +
2D Compatibility (PS) -5610 + (NN) -2645 + (LL) 372
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -33234.0 ( -104.18 by residue)
QMean score : 0.816

(partial model without unconserved sides chains):
PDB file : Tito_2DN9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DN9-query.scw
PDB file : Tito_Scwrl_2DN9.pdb: