Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFVIATFYHFVKLSNYYDMKDEIKAACDNFELKGTILLAEEGINATISGERNAINKIFNFLCSDYRLKDLTWKESAAKYQPFSKMKVRLKREIVNLGVSNLDTSLRGKYIDPDHWDDFIS--QPDVLVIDTRNEYEVKLGKFKNAINPYIQYFREFPQWAKSFSKNKNLKVAMYCTGGIRCEKSTAYMKSLGFNDVYHLKGGILSYLERTHNKNGNWEGECFVFDDRIAINSSLAPSNKIKCIFCSNQVSADELKSVSRGQVVCSDCNPS |
3ILM Chain:A ((2-100)) | --------------------------------------------------------------------------------------------------------------SDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDRASSS----LEKSRDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEGIIVSRMQNHL--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ILM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43538 for 727 contacts (-59.9/contact) +
2D Compatibility (PS) -10606 + (NN) -1132 + (LL) 10692
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -46684.0 ( -64.21 by residue)
QMean score : 0.342
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