Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRISNFGPLIAILSSSVLSFTAGQYFSYVIAAVSSSSAVTAAPLAIFAVSMVIALVSAAYLIKLAVSIAGNKKEAGPSREALDRSGQQCTVSYGLTQESVCKDGALKNELNKHISFSSSSPICGTKTFSLSAPLLLNNALPPLLSLPLSQDAGAAPPPPPPPLFSQISLTQPSSAGLFAGVKNTKLKKISGPVKTPEYDDSRNAMLKQIRQGTKLLTKEERDEKLKKQAAMKDDKKEQSSDNVGGYSSTALFEKLKYRRLAIEFSDSESDRSNYSDNGDWSDRSVDKQKELREKKLTKRRGKSTSSNSQPYDEKSSATPSSGYISDDDADQQEPETATSSSCWSNKKEPPPVPPKPNLKCVNLQKEPPPVPPKPNLKCVNLQKESRAFLIKQ |
2A40 Chain:C ((2-23)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDARSDLLSAIRQGFQLRRVEE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A40.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2035 for 67 contacts (30.4/contact) +
2D Compatibility (PS) -2411 + (NN) -1791 + (LL) 17288
1D Compatibility (HY) -1200 + (ID) 500
Total energy: 13421.0 ( 200.31 by residue)
QMean score : 0.611
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