Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKGIITNIGTIINTTIRSNSDQIFHIK-A--QNLSSIHEGDSIACSGVCLTVVDIINDIFTVQISQETMKVSNLGAWKVGKKINLEQAMRLSDKIDGHLVHGHVDETAKILTINQNLGSHEIKLSCPQELIKFVAKKGSVTLDGVSLTVNSVIGREFTVNIIPYTWQNTTFQYNKVNDYLNLEVDMIARYLDQLIQYKYN
1I8D Chain:A ((98-204))
LMSGHIMTTAEVAKILTSEN-NRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQT---------QAVVDTVERVLAARENAM----------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1I8D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61098 for 674 contacts (-90.6/contact) +
2D Compatibility (PS) -11385 + (NN) -756 + (LL) 6476
1D Compatibility (HY) -4400 + (ID) 1250
Total energy: -72413.0 ( -107.44 by residue)
QMean score : 0.409
(partial model without unconserved sides chains):
PDB file :
Tito_1I8D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I8D-query.scw
PDB file :
Tito_Scwrl_1I8D.pdb
: