Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPARSAEDVITSLIEFVNKRKVTITREEMLKIAQLVRIKLSNDEIEHYSKELTMLDWIHDILLRVNTKDVSPIRYGSIDKDIHVRDDVVNFQSMKEEILSNTKSEHGYFVVPKVIND
1FVI Chain:A ((189-292))
--FKDAEATIISMTALFKSGKVEEDV------MGSIEVDYD-GVVFSIGTGFD-ADQRRDFWQNKES----------------YIGKMVKFKYFEM-------PRFPVFIGIR----
General information:
TITO was launched using:
RESULT:
Template:
1FVI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35792 for 520 contacts (-68.8/contact) +
2D Compatibility (PS) -8095 + (NN) 2059 + (LL) 2360
1D Compatibility (HY) -4400 + (ID) 550
Total energy: -44418.0 ( -85.42 by residue)
QMean score : 0.275
(partial model without unconserved sides chains):
PDB file :
Tito_1FVI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FVI-query.scw
PDB file :
Tito_Scwrl_1FVI.pdb
: