Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAAHCYIKKLKLSNFRNH-----LNFELDSDDSSVVIIGKNGIGKTNILEAISLLAKSNGMKKAKASEMQNRFSNKDWAVHYDFFNGADLNSIGIAKSFNKKLIQIGGKMQSSYSSLYRISNVIWLIPQMDYILLNSPSDRLKFLDRIVSLFEENYACYYMRYRKAKRERGRLLRENILNKSWLSSLENIMAVNAVNILDMRLSVLKMLQDTINSYSTQFFPKVSLKFNSQLTLSDTAKYFQNRLRENREKDSLTGRITFCVNNDKFQVFCQRRDLPINLCSTGEQKLLLLSIILSSVKARCIHYNKAPLLLLDDIMSHLDKYYRKVLIEEMLSIRCQAWITDVDQNNFGNYIDYFKTIEL |
1W1W Chain:D ((7-49)) | ---------LELSNFKSYRGVTKVGF---GESNFTSIIGPNGSGKSNMMDAISFVLGVRSLKDLIYRGPQSAYVKAFYQKGNKLVELMRIISRNGDTSYKIDGKTVSYKDYSIFLENENILIKAKNFLVFQGDVEQIAAQSPVELSRMFEEVSGSIQYKKEYEELKEKIKILNQFLKIKKKRKELFEKTFDYVSDHLDAIYRELTGNASLTIEDEDEPFNAGIKYHATPPLKRFKDMEYLSGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVISLKNTMFEKSDALVGVYRQQQENSSKIITLDLSNY--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W1W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13103 for 179 contacts (-73.2/contact) +
2D Compatibility (PS) -4254 + (NN) -1485 + (LL) 2904
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -20388.0 ( -113.90 by residue)
QMean score : 0.645
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