Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFSRSFFPEGASLEGKVKTIAELNQKLESRKSHSAEKVHQGFERIVELDHQCKGKGIFRSGKVA-
2YEV Chain:C ((4-64))
-VYIALFALGAALVTLFFYLIL-NPRVLTTEGETFDLRFVLFMLLLILLAAGTVALMLLIGKAHH
General information:
TITO was launched using:
RESULT:
Template:
2YEV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 23109 for 309 contacts (74.8/contact) +
2D Compatibility (PS) -6066 + (NN) 1607 + (LL) 384
1D Compatibility (HY) -2400 + (ID) 100
Total energy: 16534.0 ( 53.51 by residue)
QMean score : -0.022
(partial model without unconserved sides chains):
PDB file :
Tito_2YEV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YEV-query.scw
PDB file :
Tito_Scwrl_2YEV.pdb
: