Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENLAYKLIKVTEAAALAAYKLVGLGDEKKADQVAVDAMRTVLNSMEINGTIVIGEGERDKAPM---LY-----------VGEKVGT-GNGPEIDIAVDPLEGTTICAHYK-QSAMSVLAAAKKGD----FLHAPDIY---------MEKIAIGKDLPIGVVSLKNSVEKNFDNLAQAKKCEVNDLTVTILKRERHNNLILK-IRKLGARVKLIDDGDIAAIVS-LINGSHDIYIGIG--GAPEGVLAA-AALSSIGGQMEGRLIFDTHQSKERAKILNIDDLEKIYSIKDMVKGESVFIATGVTSGELVDGVKFGYNICSTSSLIMLHNKVIKLQTIQNLC |
| 1JP4 Chain:A ((47-263)) | ---------------------------QTKADRMVQMSICSSLSRK-FPKLTIIGEEDLP--EVDQELIEDGQSEEILKQPCPSQYSAIKEEDLVVWVDPVDGTKEYTEGLLDNVTVLIGIAYEGKAIAGIINQP-YYNYQAGPDAVLGRTIWGVLGL-GAF-------GFQ--LKEA---PAGKH-IITTTRSHSNKLVTDCIAAMN-PDNVLRVGGAGNKIIQLIEGKASAYVFASPGCKKWDTCAPEVILHAVGGKLTDIHGNPLQYDKEVKHMNSAGVLAALRNYEYYASRVPESVKSALIP------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63658 for 1338 contacts (-47.6/contact) +
2D Compatibility (PS) -19783 + (NN) -9024 + (LL) 6292
1D Compatibility (HY) -6400 + (ID) 1700
Total energy: -94273.0 ( -70.46 by residue)
QMean score : 0.327
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