Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEAKFIFVTGGVVSSLGKGLVASSVGALLQAHGFKVRIRKLDPYLNIDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFTGIKATKDDNITTGKMYHELLKKERRGDYLGKTVQVIPHVTDLIKSFIFNGT--EGLDFVICEIGGTVGDIESQPFLEAIRQISYKLGKQRVILIHLTLVPYLAVAQELKTKPTQHSVRELNFVGLQPDIILCRSEKEISDNQRGKIANLCNVSLSNVISAPDVSHIYELPVLYNQCGLGTQVLEHFHLSKPKPSLVGWNQIVHSMRH--PMQEVTVSIVGKYTEFPDTYKSLVEALSHSAISNRIEVKINWVNSREKSGKPINEKFMGDKLKNSHAILVPGGFGDDGIEGKMLAISYARTNNIPFFGICLGMQLAVIEFARNVIKFKDVHSEEFYTCK-HPIIKLAGDK--NVDLGGTMRLGAYKCNISPNSKMAGAYSDTIISERHRHRYIINLDYKDDLEKNGLICSGMSEDGTYIEAVELENHPWFIGVQFHPEFQSKPFSPHPLFVSFIKAVVNKVKKTEG |
| 3NVA Chain:A ((2-534)) | --PNKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPYINVDAGTMNPYMHGEVFVTEDGAETDLDLGHYERFMDVNMTKYNNITAGKVYFEVIKKEREGKYLGQTVQIIPHVTDQIKDMIRYASKINNAEITLVEIGGTVGDIESLPFLEAVRQLKLEEGEDNVIFVHIALVEYLSVTGELKTKPLQHSVQELRRIGIQPDFIVGRATLPLDDETRRKIALFTNVKVDHIVSSYDVETSYEVPIILESQKLVSKILSRLKLEDRQVDLTDWISFVNNIKGINSKKTINIALVGKYTKLKDSYISIKEAIYHASAYIGVRPKLIWIESTDLESDT---KNLNEILGNVNGIIVLPGFGSRGAEGKIKAIKYAREHNIPFLGICFGFQLSIVEFARDVLGLSEANSTEINPNTKDPVITLLDEQKNVTQLGGTMRLGAQKIILKEGTIAYQLYGKKVVYERHRHRYEVNPKYVDILEDAGLVVSGISEN-GLVEIIELPSNKFFVATQAHPEFKSRPTNPSPIYLGFIRAVAS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -283295 for 4659 contacts (-60.8/contact) +
2D Compatibility (PS) -56773 + (NN) -25216 + (LL) 696
1D Compatibility (HY) -52000 + (ID) 12050
Total energy: -428638.0 ( -92.00 by residue)
QMean score : 0.495
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