Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIKVGVIGCSGRMGKRILNELITNTQVEIAGAVARLGSKYIGSDIGSAVYHSSNLGIKVTSSISDVFESSDVVIDFTTKECMLACLKAAMKFKTPLVSGTTGIESIN---LKKYAAKIPILWSANMSVGVNVLLKLVKKAAEFLDNEYDVEIWEMHHNLKKDSPSGTAMEFGKAIANALKVDFQPYQHSHNSSNIREKGKIGFAVSRGGGVVGDHSVMFINSDERIELNHKAIDRTTFARGAVRAAIWLYENKRETPGLYSMQDVI
1VM6 Chain:A ((12-224))-HMKYGIVGYSGRMGQEIQKVFSE-KGHELVLKVDVNGV--------------------------EELDSPDVVIDFSSPEALPKTVDLCKKYRAGLVLGTTALKEEHLQMLRELSKEVPVVQAYNFSIGINVLKRFLSELVKVLE-DWDVEIVETHHRFKKDAPSGTAILLESALGK----------------------SVPIHSLRVGGVPGDHVVVFGNIGETIEIKHRAISRTVFAIGALKAAEFLVGK---DPGMYSFEEVI


General information:
TITO was launched using:
RESULT:

Template: 1VM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145537 for 1733 contacts (-84.0/contact) +
2D Compatibility (PS) -22488 + (NN) -9625 + (LL) 2344
1D Compatibility (HY) -18000 + (ID) 4100
Total energy: -197406.0 ( -113.91 by residue)
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_1VM6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VM6-query.scw
PDB file : Tito_Scwrl_1VM6.pdb: