Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTILAVETSCDETAVAIVNSEKQVLAQ--EILSQTEHKKRGGVIPEIASRAHMEHLSSLIKNSIEKSNLNFCNLDATAATSGPGLIGGLIVGTMMAKAIAHVTQKPFIAVNHLEAHVLVIRLLYEVKFPFLVLLISGGHCQFLIAQNVGKYIKLGETLDDSLGEAFDKVARMLGLSYPGGPLIEKLAKKGNGTRFKLPRAMRKRPGCNFSFSGIKTAVKNLVQELEMSEQDVCDVCASFQECISEILLDRVKNAVIMAESLNIKINDFVVTGGVAANNFLRKKLKKHIN---LNILFPPINLCTDNAVMVGWTGIEILQKDYID-SLNFAPRPRWELGSY |
| 2IVN Chain:A ((1-319)) | -MLALGIEGTAHTLGIGIVSE-DKVLANVFDTLT----TEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALRVVATAARALAVKYRKPIVGVNHCIAHVEITKMFGVK-DPVGLYVS-GGNTQVLALEG-GRYRVFGETLDIGIGNAIDVFARELGLGFPGGPKVEKLAEKGEKY-IELPYAV---KGMDLSFSGLLTEAIRKYRS---GKYRVEDLAYSFQETAFAALVEVTERAVAHT-----EKDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKAGISFRLEETIVKQKFRTDEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -258700 for 2883 contacts (-89.7/contact) +
2D Compatibility (PS) -33736 + (NN) -15363 + (LL) 2088
1D Compatibility (HY) -15200 + (ID) 5050
Total energy: -325961.0 ( -113.06 by residue)
QMean score : 0.504
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